Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Fn1P11276 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fn1P11276 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fn1P11276 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Fn1P11276 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.36■□□□□ 0.37
Fn1P11276 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Fn1P11276 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.35■□□□□ 0.37
Fn1P11276 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Fn1P11276 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.35■□□□□ 0.37
Fn1P11276 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Fn1P11276 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Fn1P11276 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fn1P11276 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fn1P11276 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Fn1P11276 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Fn1P11276 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Fn1P11276 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fn1P11276 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Fn1P11276 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.32■□□□□ 0.36
Fn1P11276 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.32■□□□□ 0.36
Fn1P11276 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Fn1P11276 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fn1P11276 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Fn1P11276 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fn1P11276 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Fn1P11276 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.31■□□□□ 0.36
Fn1P11276 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fn1P11276 Gm7291-201ENSMUST00000199147 382 ntBASIC17.3■□□□□ 0.36
Fn1P11276 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.3■□□□□ 0.36
Fn1P11276 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Fn1P11276 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fn1P11276 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Fn1P11276 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fn1P11276 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Fn1P11276 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.28■□□□□ 0.36
Fn1P11276 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Fn1P11276 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Fn1P11276 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
Fn1P11276 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.28■□□□□ 0.36
Fn1P11276 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.27■□□□□ 0.36
Fn1P11276 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Fn1P11276 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
Fn1P11276 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.27■□□□□ 0.35
Fn1P11276 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.27■□□□□ 0.35
Fn1P11276 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Fn1P11276 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fn1P11276 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fn1P11276 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.26■□□□□ 0.35
Fn1P11276 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Fn1P11276 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Fn1P11276 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
Fn1P11276 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fn1P11276 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Fn1P11276 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Fn1P11276 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Fn1P11276 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Fn1P11276 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.25■□□□□ 0.35
Fn1P11276 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.25■□□□□ 0.35
Fn1P11276 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.24■□□□□ 0.35
Fn1P11276 Gm10399-202ENSMUST00000202768 748 ntBASIC17.24■□□□□ 0.35
Fn1P11276 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC17.24■□□□□ 0.35
Fn1P11276 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Fn1P11276 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Fn1P11276 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Fn1P11276 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Fn1P11276 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fn1P11276 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fn1P11276 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fn1P11276 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fn1P11276 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
Fn1P11276 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.23■□□□□ 0.35
Fn1P11276 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fn1P11276 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fn1P11276 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms