Protein–RNA interactions for Protein: P0C2I9

TY1B-PR1, Transposon Ty1-PR1 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR1P0C2I9 YPL062WYPL062W 405 nt9.12□□□□□ -0.95
TY1B-PR1P0C2I9 GUD1YDL238C 1470 nt9.12□□□□□ -0.95
TY1B-PR1P0C2I9 SLA2YNL243W 2907 nt9.12□□□□□ -0.95
TY1B-PR1P0C2I9 AMD1YML035C 2433 nt9.12□□□□□ -0.95
TY1B-PR1P0C2I9 MCH2YKL221W 1422 nt9.12□□□□□ -0.95
TY1B-PR1P0C2I9 GIT1YCR098C 1557 nt9.11□□□□□ -0.95
TY1B-PR1P0C2I9 YGR182CYGR182C 354 nt9.11□□□□□ -0.95
TY1B-PR1P0C2I9 PAN6YIL145C 930 nt9.11□□□□□ -0.95
TY1B-PR1P0C2I9 TAH11YJR046W 1815 nt9.1□□□□□ -0.95
TY1B-PR1P0C2I9 MTC1YJL123C 1437 nt9.1□□□□□ -0.95
TY1B-PR1P0C2I9 AIM34YMR003W 597 nt9.09□□□□□ -0.95
TY1B-PR1P0C2I9 RPL5YPL131W 894 nt9.09□□□□□ -0.95
TY1B-PR1P0C2I9 YCL041CYCL041C 495 nt9.09□□□□□ -0.95
TY1B-PR1P0C2I9 ORC5YNL261W 1440 nt9.09□□□□□ -0.95
TY1B-PR1P0C2I9 YDR109CYDR109C 2148 nt9.09□□□□□ -0.96
TY1B-PR1P0C2I9 BDF2YDL070W 1917 nt9.08□□□□□ -0.96
TY1B-PR1P0C2I9 LEU5YHR002W 1074 nt9.08□□□□□ -0.96
TY1B-PR1P0C2I9 GSH1YJL101C 2037 nt9.08□□□□□ -0.96
TY1B-PR1P0C2I9 YEL053W-AYEL053W-A 348 nt9.07□□□□□ -0.96
TY1B-PR1P0C2I9 THI2YBR240C 1353 nt9.07□□□□□ -0.96
TY1B-PR1P0C2I9 YNR042WYNR042W 429 nt9.07□□□□□ -0.96
TY1B-PR1P0C2I9 YCR097W-AYCR097W-A 267 nt9.06□□□□□ -0.96
TY1B-PR1P0C2I9 GPH1YPR160W 2709 nt9.06□□□□□ -0.96
TY1B-PR1P0C2I9 YHR070C-AYHR070C-A 411 nt9.05□□□□□ -0.96
TY1B-PR1P0C2I9 CYB2YML054C 1776 nt9.05□□□□□ -0.96
TY1B-PR1P0C2I9 QCR8YJL166W 285 nt9.04□□□□□ -0.96
TY1B-PR1P0C2I9 RTG2YGL252C 1767 nt9.04□□□□□ -0.96
TY1B-PR1P0C2I9 XBP1YIL101C 1944 nt9.03□□□□□ -0.96
TY1B-PR1P0C2I9 GTT3YEL017W 1014 nt9.03□□□□□ -0.96
TY1B-PR1P0C2I9 BBP1YPL255W 1158 nt9.02□□□□□ -0.97
TY1B-PR1P0C2I9 PRO3YER023W 861 nt9.01□□□□□ -0.97
TY1B-PR1P0C2I9 DJP1YIR004W 1299 nt9.01□□□□□ -0.97
TY1B-PR1P0C2I9 YGL194C-AYGL194C-A 243 nt9.01□□□□□ -0.97
TY1B-PR1P0C2I9 SHM1YBR263W 1473 nt9□□□□□ -0.97
TY1B-PR1P0C2I9 YGR176WYGR176W 348 nt9□□□□□ -0.97
TY1B-PR1P0C2I9 QNS1YHR074W 2145 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 YCR075W-AYCR075W-A 228 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 YDL034WYDL034W 345 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 OPI8YKR035C 642 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 DPH5YLR172C 903 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 BNA3YJL060W 1335 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 PAC10YGR078C 600 nt8.99□□□□□ -0.97
TY1B-PR1P0C2I9 PMT3YOR321W 2262 nt8.98□□□□□ -0.97
TY1B-PR1P0C2I9 HSX1tR(CCU)J 72 nt8.98□□□□□ -0.97
TY1B-PR1P0C2I9 PGU1YJR153W 1086 nt8.98□□□□□ -0.97
TY1B-PR1P0C2I9 ATP14YLR295C 375 nt8.97□□□□□ -0.97
TY1B-PR1P0C2I9 YHM2YMR241W 945 nt8.97□□□□□ -0.97
TY1B-PR1P0C2I9 VPS61YDR136C 573 nt8.96□□□□□ -0.97
TY1B-PR1P0C2I9 ATO3YDR384C 828 nt8.96□□□□□ -0.97
TY1B-PR1P0C2I9 CSG2YBR036C 1233 nt8.96□□□□□ -0.97
TY1B-PR1P0C2I9 YMC1YPR058W 924 nt8.96□□□□□ -0.97
TY1B-PR1P0C2I9 KKQ8YKL168C 2175 nt8.96□□□□□ -0.98
TY1B-PR1P0C2I9 SLO1YER180C-A 258 nt8.96□□□□□ -0.98
TY1B-PR1P0C2I9 PGM1YKL127W 1713 nt8.96□□□□□ -0.98
TY1B-PR1P0C2I9 IPI1YHR085W 1005 nt8.95□□□□□ -0.98
TY1B-PR1P0C2I9 PRM10YJL108C 1152 nt8.95□□□□□ -0.98
TY1B-PR1P0C2I9 YAP1801YHR161C 1914 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 DAL82YNL314W 768 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 ITR1YDR497C 1755 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 YDR154CYDR154C 351 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 YKL151CYKL151C 1014 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 YBR144CYBR144C 315 nt8.94□□□□□ -0.98
TY1B-PR1P0C2I9 ALR1YOL130W 2580 nt8.93□□□□□ -0.98
TY1B-PR1P0C2I9 GAT3YLR013W 426 nt8.93□□□□□ -0.98
TY1B-PR1P0C2I9 YBR124WYBR124W 360 nt8.93□□□□□ -0.98
TY1B-PR1P0C2I9 GIR2YDR152W 798 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 CAD1YDR423C 1230 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 YMR253CYMR253C 1245 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 TIM54YJL054W 1437 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 RTT106YNL206C 1368 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 NOB1YOR056C 1380 nt8.92□□□□□ -0.98
TY1B-PR1P0C2I9 YCL065WYCL065W 369 nt8.91□□□□□ -0.98
TY1B-PR1P0C2I9 APS3YJL024C 585 nt8.91□□□□□ -0.98
TY1B-PR1P0C2I9 NDC1YML031W 1968 nt8.91□□□□□ -0.98
TY1B-PR1P0C2I9 NTG1YAL015C 1200 nt8.91□□□□□ -0.98
TY1B-PR1P0C2I9 YJR115WYJR115W 510 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 YLL059CYLL059C 507 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 COX9YDL067C 180 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 CWC21YDR482C 408 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 ECM15YBL001C 315 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 SAM4YPL273W 978 nt8.89□□□□□ -0.99
TY1B-PR1P0C2I9 AGP2YBR132C 1791 nt8.88□□□□□ -0.99
TY1B-PR1P0C2I9 RPT6YGL048C 1218 nt8.88□□□□□ -0.99
TY1B-PR1P0C2I9 SUF5tG(CCC)O 72 nt8.87□□□□□ -0.99
TY1B-PR1P0C2I9 CIS3YJL158C 684 nt8.86□□□□□ -0.99
TY1B-PR1P0C2I9 ECM27YJR106W 2178 nt8.85□□□□□ -0.99
TY1B-PR1P0C2I9 UTR4YEL038W 684 nt8.85□□□□□ -0.99
TY1B-PR1P0C2I9 YLR173WYLR173W 1827 nt8.85□□□□□ -0.99
TY1B-PR1P0C2I9 VRP1YLR337C 2454 nt8.84□□□□□ -0.99
TY1B-PR1P0C2I9 GYP8YFL027C 1494 nt8.84□□□□□ -1
TY1B-PR1P0C2I9 YHR127WYHR127W 732 nt8.83□□□□□ -1
TY1B-PR1P0C2I9 HIS7YBR248C 1659 nt8.82□□□□□ -1
TY1B-PR1P0C2I9 EFM1YHL039W 1758 nt8.82□□□□□ -1
TY1B-PR1P0C2I9 YHC3YJL059W 1227 nt8.82□□□□□ -1
TY1B-PR1P0C2I9 YOR318CYOR318C 306 nt8.82□□□□□ -1
TY1B-PR1P0C2I9 tN(GUU)CtN(GUU)C 74 nt8.81□□□□□ -1
TY1B-PR1P0C2I9 tN(GUU)FtN(GUU)F 74 nt8.81□□□□□ -1
TY1B-PR1P0C2I9 tN(GUU)GtN(GUU)G 74 nt8.81□□□□□ -1
TY1B-PR1P0C2I9 tN(GUU)KtN(GUU)K 74 nt8.81□□□□□ -1
TY1B-PR1P0C2I9 tN(GUU)LtN(GUU)L 74 nt8.81□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 12 ms