Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
P06323 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.53■□□□□ 0.4
P06323 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
P06323 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P06323 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P06323 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
P06323 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06323 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06323 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.52■□□□□ 0.4
P06323 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P06323 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P06323 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P06323 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
P06323 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
P06323 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
P06323 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06323 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06323 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.51■□□□□ 0.39
P06323 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06323 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P06323 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.51■□□□□ 0.39
P06323 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.5■□□□□ 0.39
P06323 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P06323 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06323 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P06323 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P06323 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.5■□□□□ 0.39
P06323 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06323 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06323 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P06323 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.49■□□□□ 0.39
P06323 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
P06323 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.49■□□□□ 0.39
P06323 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P06323 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.49■□□□□ 0.39
P06323 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.49■□□□□ 0.39
P06323 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P06323 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P06323 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P06323 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.48■□□□□ 0.39
P06323 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
P06323 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
P06323 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06323 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.46■□□□□ 0.39
P06323 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06323 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06323 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P06323 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P06323 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
P06323 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P06323 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.44■□□□□ 0.38
P06323 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.44■□□□□ 0.38
P06323 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
P06323 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
P06323 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06323 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
P06323 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
P06323 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
P06323 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
P06323 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
P06323 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.43■□□□□ 0.38
P06323 Gm6311-201ENSMUST00000073790 878 ntBASIC17.43■□□□□ 0.38
P06323 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
P06323 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06323 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06323 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06323 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06323 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
P06323 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
P06323 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
P06323 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
P06323 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.41■□□□□ 0.38
P06323 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.41■□□□□ 0.38
P06323 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
P06323 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
P06323 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms