Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tulp3O88413 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tulp3O88413 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tulp3O88413 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tulp3O88413 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Tulp3O88413 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.27■□□□□ 0.84
Tulp3O88413 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Tulp3O88413 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tulp3O88413 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Tulp3O88413 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Tulp3O88413 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Gm9812-201ENSMUST00000061934 968 ntBASIC20.26■□□□□ 0.83
Tulp3O88413 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tulp3O88413 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tulp3O88413 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tulp3O88413 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
Tulp3O88413 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tulp3O88413 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Tulp3O88413 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tulp3O88413 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Tulp3O88413 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Tulp3O88413 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tulp3O88413 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tulp3O88413 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Tulp3O88413 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.23■□□□□ 0.83
Tulp3O88413 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.23■□□□□ 0.83
Tulp3O88413 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.23■□□□□ 0.83
Tulp3O88413 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tulp3O88413 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tulp3O88413 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
Tulp3O88413 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tulp3O88413 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tulp3O88413 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tulp3O88413 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tulp3O88413 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tulp3O88413 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tulp3O88413 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tulp3O88413 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.21■□□□□ 0.83
Tulp3O88413 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tulp3O88413 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Tulp3O88413 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.2■□□□□ 0.82
Tulp3O88413 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tulp3O88413 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Tulp3O88413 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tulp3O88413 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Tulp3O88413 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Tulp3O88413 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Tulp3O88413 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.19■□□□□ 0.82
Tulp3O88413 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tulp3O88413 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tulp3O88413 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tulp3O88413 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Tulp3O88413 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tulp3O88413 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tulp3O88413 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tulp3O88413 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.17■□□□□ 0.82
Tulp3O88413 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tulp3O88413 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.17■□□□□ 0.82
Tulp3O88413 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.17■□□□□ 0.82
Tulp3O88413 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tulp3O88413 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.16■□□□□ 0.82
Tulp3O88413 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tulp3O88413 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tulp3O88413 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.16■□□□□ 0.82
Tulp3O88413 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tulp3O88413 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tulp3O88413 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tulp3O88413 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.16■□□□□ 0.82
Tulp3O88413 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.15■□□□□ 0.82
Tulp3O88413 Mir3960-201ENSMUST00000198213 73 ntBASIC20.15■□□□□ 0.82
Tulp3O88413 Terc-201ENSMUST00000082862 423 ntBASIC20.15■□□□□ 0.82
Tulp3O88413 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.15■□□□□ 0.82
Tulp3O88413 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Tulp3O88413 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tulp3O88413 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.15■□□□□ 0.82
Tulp3O88413 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms