Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.25■□□□□ 0.99
Cdh16O88338 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh16O88338 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.25■□□□□ 0.99
Cdh16O88338 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh16O88338 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdh16O88338 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh16O88338 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh16O88338 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Cdh16O88338 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Cdh16O88338 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdh16O88338 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
Cdh16O88338 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdh16O88338 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh16O88338 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
Cdh16O88338 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh16O88338 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh16O88338 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdh16O88338 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cdh16O88338 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh16O88338 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh16O88338 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cdh16O88338 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdh16O88338 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Cdh16O88338 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cdh16O88338 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdh16O88338 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cdh16O88338 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdh16O88338 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cdh16O88338 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.18■□□□□ 0.98
Cdh16O88338 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdh16O88338 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Cdh16O88338 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh16O88338 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh16O88338 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdh16O88338 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cdh16O88338 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Cdh16O88338 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh16O88338 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh16O88338 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdh16O88338 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Cdh16O88338 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cdh16O88338 Gm37136-201ENSMUST00000194368 194 ntBASIC21.15■□□□□ 0.98
Cdh16O88338 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cdh16O88338 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cdh16O88338 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh16O88338 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdh16O88338 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.13■□□□□ 0.97
Cdh16O88338 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Cdh16O88338 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh16O88338 Gm8503-201ENSMUST00000118131 455 ntBASIC21.13■□□□□ 0.97
Cdh16O88338 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh16O88338 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdh16O88338 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cdh16O88338 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdh16O88338 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh16O88338 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cdh16O88338 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cdh16O88338 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cdh16O88338 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cdh16O88338 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh16O88338 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh16O88338 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh16O88338 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.11■□□□□ 0.97
Cdh16O88338 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdh16O88338 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Cdh16O88338 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh16O88338 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.1■□□□□ 0.97
Cdh16O88338 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdh16O88338 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Cdh16O88338 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh16O88338 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh16O88338 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.09■□□□□ 0.97
Cdh16O88338 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh16O88338 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh16O88338 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdh16O88338 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh16O88338 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdh16O88338 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Cdh16O88338 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.07■□□□□ 0.96
Cdh16O88338 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdh16O88338 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms