Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.7■□□□□ 0.74
Pdlim3O70209 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.7■□□□□ 0.74
Pdlim3O70209 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.7■□□□□ 0.74
Pdlim3O70209 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim3O70209 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pdlim3O70209 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pdlim3O70209 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Pdlim3O70209 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim3O70209 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Pdlim3O70209 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim3O70209 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim3O70209 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.69■□□□□ 0.74
Pdlim3O70209 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.69■□□□□ 0.74
Pdlim3O70209 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim3O70209 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
Pdlim3O70209 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pdlim3O70209 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim3O70209 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.68■□□□□ 0.74
Pdlim3O70209 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim3O70209 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.68■□□□□ 0.74
Pdlim3O70209 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim3O70209 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pdlim3O70209 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim3O70209 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
Pdlim3O70209 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pdlim3O70209 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.66■□□□□ 0.74
Pdlim3O70209 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.66■□□□□ 0.74
Pdlim3O70209 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pdlim3O70209 Mir3960-201ENSMUST00000198213 73 ntBASIC19.65■□□□□ 0.74
Pdlim3O70209 Terc-201ENSMUST00000082862 423 ntBASIC19.65■□□□□ 0.74
Pdlim3O70209 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim3O70209 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdlim3O70209 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim3O70209 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pdlim3O70209 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pdlim3O70209 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.63■□□□□ 0.73
Pdlim3O70209 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdlim3O70209 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.62■□□□□ 0.73
Pdlim3O70209 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Gm8503-201ENSMUST00000118131 455 ntBASIC19.62■□□□□ 0.73
Pdlim3O70209 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.62■□□□□ 0.73
Pdlim3O70209 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdlim3O70209 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim3O70209 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.61■□□□□ 0.73
Pdlim3O70209 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim3O70209 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pdlim3O70209 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.61■□□□□ 0.73
Pdlim3O70209 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim3O70209 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdlim3O70209 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.6■□□□□ 0.73
Pdlim3O70209 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim3O70209 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim3O70209 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pdlim3O70209 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pdlim3O70209 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim3O70209 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Pdlim3O70209 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim3O70209 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim3O70209 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim3O70209 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim3O70209 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.59■□□□□ 0.73
Pdlim3O70209 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.59■□□□□ 0.73
Pdlim3O70209 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim3O70209 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim3O70209 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim3O70209 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim3O70209 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim3O70209 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim3O70209 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Pdlim3O70209 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.58■□□□□ 0.73
Pdlim3O70209 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pdlim3O70209 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim3O70209 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim3O70209 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
Pdlim3O70209 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim3O70209 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim3O70209 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pdlim3O70209 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim3O70209 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pdlim3O70209 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pdlim3O70209 Gm45364-201ENSMUST00000210883 159 ntBASIC19.57■□□□□ 0.72
Pdlim3O70209 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim3O70209 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.57■□□□□ 0.72
Pdlim3O70209 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim3O70209 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms