Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sigmar1O55242 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sigmar1O55242 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sigmar1O55242 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sigmar1O55242 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Sigmar1O55242 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Sigmar1O55242 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sigmar1O55242 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sigmar1O55242 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sigmar1O55242 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sigmar1O55242 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sigmar1O55242 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Sigmar1O55242 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Sigmar1O55242 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sigmar1O55242 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.94□□□□□ -0.02
Sigmar1O55242 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sigmar1O55242 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC14.94□□□□□ -0.02
Sigmar1O55242 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sigmar1O55242 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC14.94□□□□□ -0.02
Sigmar1O55242 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sigmar1O55242 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sigmar1O55242 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC14.94□□□□□ -0.02
Sigmar1O55242 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sigmar1O55242 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Sigmar1O55242 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sigmar1O55242 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sigmar1O55242 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sigmar1O55242 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sigmar1O55242 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sigmar1O55242 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.92□□□□□ -0.02
Sigmar1O55242 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sigmar1O55242 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sigmar1O55242 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Golph3-202ENSMUST00000226517 2359 ntBASIC14.91□□□□□ -0.02
Sigmar1O55242 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.91□□□□□ -0.02
Sigmar1O55242 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.91□□□□□ -0.02
Sigmar1O55242 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sigmar1O55242 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sigmar1O55242 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.9□□□□□ -0.02
Sigmar1O55242 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sigmar1O55242 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sigmar1O55242 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.89□□□□□ -0.03
Sigmar1O55242 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sigmar1O55242 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sigmar1O55242 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC14.89□□□□□ -0.03
Sigmar1O55242 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sigmar1O55242 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sigmar1O55242 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sigmar1O55242 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.88□□□□□ -0.03
Sigmar1O55242 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sigmar1O55242 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sigmar1O55242 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sigmar1O55242 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms