Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.78■□□□□ 0.6
Gfra3O35118 Gm43566-201ENSMUST00000196851 808 ntBASIC18.78■□□□□ 0.6
Gfra3O35118 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.78■□□□□ 0.6
Gfra3O35118 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra3O35118 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gfra3O35118 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Gfra3O35118 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gfra3O35118 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gfra3O35118 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gfra3O35118 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.76■□□□□ 0.59
Gfra3O35118 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gfra3O35118 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gfra3O35118 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gfra3O35118 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.76■□□□□ 0.59
Gfra3O35118 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Gfra3O35118 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
Gfra3O35118 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.76■□□□□ 0.59
Gfra3O35118 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Gfra3O35118 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Gfra3O35118 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Gfra3O35118 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.74■□□□□ 0.59
Gfra3O35118 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.74■□□□□ 0.59
Gfra3O35118 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gfra3O35118 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gfra3O35118 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.73■□□□□ 0.59
Gfra3O35118 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gfra3O35118 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gfra3O35118 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gfra3O35118 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gfra3O35118 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.73■□□□□ 0.59
Gfra3O35118 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfra3O35118 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gfra3O35118 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Gfra3O35118 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.72■□□□□ 0.59
Gfra3O35118 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.72■□□□□ 0.59
Gfra3O35118 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfra3O35118 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Gfra3O35118 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfra3O35118 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gfra3O35118 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfra3O35118 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfra3O35118 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gfra3O35118 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.71■□□□□ 0.59
Gfra3O35118 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfra3O35118 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gfra3O35118 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Gfra3O35118 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Gfra3O35118 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gfra3O35118 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gfra3O35118 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.7■□□□□ 0.58
Gfra3O35118 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gfra3O35118 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gfra3O35118 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Gfra3O35118 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gfra3O35118 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.69■□□□□ 0.58
Gfra3O35118 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gfra3O35118 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Gfra3O35118 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Gfra3O35118 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gfra3O35118 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gfra3O35118 Gm15546-201ENSMUST00000122095 826 ntBASIC18.68■□□□□ 0.58
Gfra3O35118 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.68■□□□□ 0.58
Gfra3O35118 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.68■□□□□ 0.58
Gfra3O35118 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.68■□□□□ 0.58
Gfra3O35118 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gfra3O35118 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gfra3O35118 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gfra3O35118 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gfra3O35118 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Gfra3O35118 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gfra3O35118 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gfra3O35118 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
Gfra3O35118 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Gfra3O35118 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfra3O35118 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfra3O35118 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gfra3O35118 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gfra3O35118 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Gfra3O35118 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms