Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C530025M09RikF6RGA8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C530025M09RikF6RGA8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
C530025M09RikF6RGA8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
C530025M09RikF6RGA8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
C530025M09RikF6RGA8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
C530025M09RikF6RGA8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C530025M09RikF6RGA8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C530025M09RikF6RGA8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
C530025M09RikF6RGA8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
C530025M09RikF6RGA8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC14.29□□□□□ -0.12
C530025M09RikF6RGA8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
C530025M09RikF6RGA8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC14.27□□□□□ -0.12
C530025M09RikF6RGA8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
C530025M09RikF6RGA8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C530025M09RikF6RGA8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
C530025M09RikF6RGA8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC14.27□□□□□ -0.12
C530025M09RikF6RGA8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C530025M09RikF6RGA8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C530025M09RikF6RGA8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C530025M09RikF6RGA8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
C530025M09RikF6RGA8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C530025M09RikF6RGA8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Gm7432-201ENSMUST00000210343 879 ntBASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C530025M09RikF6RGA8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Gm37415-201ENSMUST00000192265 2054 ntBASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
C530025M09RikF6RGA8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Gm11599-201ENSMUST00000118720 878 ntBASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.23□□□□□ -0.13
C530025M09RikF6RGA8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Gm12504-201ENSMUST00000120860 2231 ntBASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
C530025M09RikF6RGA8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
C530025M09RikF6RGA8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC14.21□□□□□ -0.13
C530025M09RikF6RGA8 Pkd1-207ENSMUST00000228550 1050 ntBASIC14.21□□□□□ -0.13
C530025M09RikF6RGA8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C530025M09RikF6RGA8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
C530025M09RikF6RGA8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
C530025M09RikF6RGA8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms