Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC47.49■■■■■ 5.19
Gm35339A0A140LHH9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC47.48■■■■■ 5.19
Gm35339A0A140LHH9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC47.48■■■■■ 5.19
Gm35339A0A140LHH9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC47.48■■■■■ 5.19
Gm35339A0A140LHH9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC47.48■■■■■ 5.19
Gm35339A0A140LHH9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC47.48■■■■■ 5.19
Gm35339A0A140LHH9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC47.47■■■■■ 5.19
Gm35339A0A140LHH9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC47.47■■■■■ 5.19
Gm35339A0A140LHH9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC47.47■■■■■ 5.19
Gm35339A0A140LHH9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC47.46■■■■■ 5.19
Gm35339A0A140LHH9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC47.46■■■■■ 5.19
Gm35339A0A140LHH9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC47.46■■■■■ 5.19
Gm35339A0A140LHH9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC47.46■■■■■ 5.19
Gm35339A0A140LHH9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC47.46■■■■■ 5.19
Gm35339A0A140LHH9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC47.45■■■■■ 5.19
Gm35339A0A140LHH9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC47.45■■■■■ 5.19
Gm35339A0A140LHH9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC47.45■■■■■ 5.19
Gm35339A0A140LHH9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC47.44■■■■■ 5.19
Gm35339A0A140LHH9 Gm10399-202ENSMUST00000202768 748 ntBASIC47.44■■■■■ 5.18
Gm35339A0A140LHH9 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC47.43■■■■■ 5.18
Gm35339A0A140LHH9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC47.43■■■■■ 5.18
Gm35339A0A140LHH9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC47.43■■■■■ 5.18
Gm35339A0A140LHH9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC47.42■■■■■ 5.18
Gm35339A0A140LHH9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC47.42■■■■■ 5.18
Gm35339A0A140LHH9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC47.42■■■■■ 5.18
Gm35339A0A140LHH9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC47.42■■■■■ 5.18
Gm35339A0A140LHH9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC47.42■■■■■ 5.18
Gm35339A0A140LHH9 Gm12821-201ENSMUST00000120022 600 ntBASIC47.41■■■■■ 5.18
Gm35339A0A140LHH9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC47.41■■■■■ 5.18
Gm35339A0A140LHH9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC47.41■■■■■ 5.18
Gm35339A0A140LHH9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC47.4■■■■■ 5.18
Gm35339A0A140LHH9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC47.39■■■■■ 5.18
Gm35339A0A140LHH9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC47.39■■■■■ 5.18
Gm35339A0A140LHH9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC47.39■■■■■ 5.18
Gm35339A0A140LHH9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC47.38■■■■■ 5.17
Gm35339A0A140LHH9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC47.38■■■■■ 5.17
Gm35339A0A140LHH9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC47.38■■■■■ 5.17
Gm35339A0A140LHH9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC47.37■■■■■ 5.17
Gm35339A0A140LHH9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC47.37■■■■■ 5.17
Gm35339A0A140LHH9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC47.37■■■■■ 5.17
Gm35339A0A140LHH9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC47.37■■■■■ 5.17
Gm35339A0A140LHH9 Golgb1-201ENSMUST00000023534 498 ntBASIC47.37■■■■■ 5.17
Gm35339A0A140LHH9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC47.36■■■■■ 5.17
Gm35339A0A140LHH9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC47.36■■■■■ 5.17
Gm35339A0A140LHH9 Fezf2-202ENSMUST00000224023 1917 ntBASIC47.35■■■■■ 5.17
Gm35339A0A140LHH9 Slc35b2-207ENSMUST00000226086 850 ntBASIC47.35■■■■■ 5.17
Gm35339A0A140LHH9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC47.35■■■■■ 5.17
Gm35339A0A140LHH9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC47.34■■■■■ 5.17
Gm35339A0A140LHH9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC47.33■■■■■ 5.17
Gm35339A0A140LHH9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC47.32■■■■■ 5.17
Gm35339A0A140LHH9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC47.32■■■■■ 5.17
Gm35339A0A140LHH9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC47.32■■■■■ 5.17
Gm35339A0A140LHH9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC47.32■■■■■ 5.17
Gm35339A0A140LHH9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC47.31■■■■■ 5.16
Gm35339A0A140LHH9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC47.3■■■■■ 5.16
Gm35339A0A140LHH9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC47.3■■■■■ 5.16
Gm35339A0A140LHH9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC47.29■■■■■ 5.16
Gm35339A0A140LHH9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC47.29■■■■■ 5.16
Gm35339A0A140LHH9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC47.29■■■■■ 5.16
Gm35339A0A140LHH9 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC47.29■■■■■ 5.16
Gm35339A0A140LHH9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC47.28■■■■■ 5.16
Gm35339A0A140LHH9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC47.28■■■■■ 5.16
Gm35339A0A140LHH9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC47.28■■■■■ 5.16
Gm35339A0A140LHH9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC47.28■■■■■ 5.16
Gm35339A0A140LHH9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC47.28■■■■■ 5.16
Gm35339A0A140LHH9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC47.27■■■■■ 5.16
Gm35339A0A140LHH9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC47.27■■■■■ 5.16
Gm35339A0A140LHH9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC47.27■■■■■ 5.16
Gm35339A0A140LHH9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC47.27■■■■■ 5.16
Gm35339A0A140LHH9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC47.27■■■■■ 5.16
Gm35339A0A140LHH9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC47.26■■■■■ 5.16
Gm35339A0A140LHH9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC47.26■■■■■ 5.16
Gm35339A0A140LHH9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC47.25■■■■■ 5.15
Gm35339A0A140LHH9 Gm11847-201ENSMUST00000125165 1119 ntBASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC47.23■■■■■ 5.15
Gm35339A0A140LHH9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC47.22■■■■■ 5.15
Gm35339A0A140LHH9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC47.19■■■■■ 5.15
Gm35339A0A140LHH9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC47.19■■■■■ 5.14
Gm35339A0A140LHH9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC47.19■■■■■ 5.14
Gm35339A0A140LHH9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC47.19■■■■■ 5.14
Gm35339A0A140LHH9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC47.17■■■■■ 5.14
Gm35339A0A140LHH9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC47.17■■■■■ 5.14
Gm35339A0A140LHH9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC47.16■■■■■ 5.14
Gm35339A0A140LHH9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC47.15■■■■■ 5.14
Gm35339A0A140LHH9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC47.15■■■■■ 5.14
Gm35339A0A140LHH9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC47.15■■■■■ 5.14
Gm35339A0A140LHH9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC47.13■■■■■ 5.14
Gm35339A0A140LHH9 Gm8093-201ENSMUST00000128935 1892 ntBASIC47.13■■■■■ 5.14
Gm35339A0A140LHH9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC47.13■■■■■ 5.14
Gm35339A0A140LHH9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC47.13■■■■■ 5.14
Gm35339A0A140LHH9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC47.13■■■■■ 5.13
Gm35339A0A140LHH9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC47.12■■■■■ 5.13
Gm35339A0A140LHH9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC47.12■■■■■ 5.13
Gm35339A0A140LHH9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC47.11■■■■■ 5.13
Gm35339A0A140LHH9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC47.11■■■■■ 5.13
Gm35339A0A140LHH9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC47.1■■■■■ 5.13
Retrieved 100 of 76,532 protein–RNA pairs in 176.5 ms