Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Igkv5-43A0A0B4J1J2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Igkv5-43A0A0B4J1J2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Igkv5-43A0A0B4J1J2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.49■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Gm15546-201ENSMUST00000122095 826 ntBASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Igkv5-43A0A0B4J1J2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv5-43A0A0B4J1J2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv5-43A0A0B4J1J2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv5-43A0A0B4J1J2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.4■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Igkv5-43A0A0B4J1J2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Igkv5-43A0A0B4J1J2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Igkv5-43A0A0B4J1J2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
Igkv5-43A0A0B4J1J2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv5-43A0A0B4J1J2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv5-43A0A0B4J1J2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv5-43A0A0B4J1J2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Igkv5-43A0A0B4J1J2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.38■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms