Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gm10616-201ENSMUST00000205285 2127 ntBASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trbv13-3A0A0B4J1H2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gm24970-201ENSMUST00000175582 82 ntBASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trbv13-3A0A0B4J1H2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trbv13-3A0A0B4J1H2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv13-3A0A0B4J1H2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.9■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv13-3A0A0B4J1H2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv13-3A0A0B4J1H2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms