Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
Ighv1-20A0A0A6YX66 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-20A0A0A6YX66 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-20A0A0A6YX66 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-20A0A0A6YX66 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-20A0A0A6YX66 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-20A0A0A6YX66 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-20A0A0A6YX66 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-20A0A0A6YX66 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-20A0A0A6YX66 Gm13238-201ENSMUST00000117655 780 ntBASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-20A0A0A6YX66 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-20A0A0A6YX66 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm15546-201ENSMUST00000122095 826 ntBASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ighv1-20A0A0A6YX66 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-20A0A0A6YX66 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-20A0A0A6YX66 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ighv1-20A0A0A6YX66 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ighv1-20A0A0A6YX66 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ighv1-20A0A0A6YX66 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ighv1-20A0A0A6YX66 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-20A0A0A6YX66 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ighv1-20A0A0A6YX66 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.52■□□□□ 0.4
Ighv1-20A0A0A6YX66 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ighv1-20A0A0A6YX66 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.52■□□□□ 0.4
Ighv1-20A0A0A6YX66 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-20A0A0A6YX66 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-20A0A0A6YX66 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ighv1-20A0A0A6YX66 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.51■□□□□ 0.39
Ighv1-20A0A0A6YX66 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-20A0A0A6YX66 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-20A0A0A6YX66 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-20A0A0A6YX66 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ighv1-20A0A0A6YX66 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Gm15820-201ENSMUST00000201566 728 ntBASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ighv1-20A0A0A6YX66 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ighv1-20A0A0A6YX66 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ighv1-20A0A0A6YX66 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms