Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv1A0A075B657 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trdv1A0A075B657 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trdv1A0A075B657 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trdv1A0A075B657 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trdv1A0A075B657 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.53■□□□□ 0.24
Trdv1A0A075B657 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trdv1A0A075B657 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdv1A0A075B657 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trdv1A0A075B657 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trdv1A0A075B657 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv1A0A075B657 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv1A0A075B657 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv1A0A075B657 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trdv1A0A075B657 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trdv1A0A075B657 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trdv1A0A075B657 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trdv1A0A075B657 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.48■□□□□ 0.23
Trdv1A0A075B657 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trdv1A0A075B657 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Mir3960-201ENSMUST00000198213 73 ntBASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Terc-201ENSMUST00000082862 423 ntBASIC16.47■□□□□ 0.23
Trdv1A0A075B657 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trdv1A0A075B657 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.46■□□□□ 0.23
Trdv1A0A075B657 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv1A0A075B657 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trdv1A0A075B657 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv1A0A075B657 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trdv1A0A075B657 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trdv1A0A075B657 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trdv1A0A075B657 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.45■□□□□ 0.22
Trdv1A0A075B657 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.45■□□□□ 0.22
Trdv1A0A075B657 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms