Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7n-5A0A075B604 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Gm5921-201ENSMUST00000075898 882 ntBASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7n-5A0A075B604 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7n-5A0A075B604 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7n-5A0A075B604 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
Trav7n-5A0A075B604 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trav7n-5A0A075B604 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav7n-5A0A075B604 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav7n-5A0A075B604 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7n-5A0A075B604 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7n-5A0A075B604 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7n-5A0A075B604 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7n-5A0A075B604 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Gm45444-201ENSMUST00000211394 898 ntBASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7n-5A0A075B604 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7n-5A0A075B604 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7n-5A0A075B604 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms