Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-6A0A075B603 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.13■□□□□ 0.17
Trav6-6A0A075B603 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav6-6A0A075B603 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Gm8503-201ENSMUST00000118131 455 ntBASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav6-6A0A075B603 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav6-6A0A075B603 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6-6A0A075B603 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6-6A0A075B603 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 AC153524.1-201ENSMUST00000220436 1935 ntBASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6-6A0A075B603 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trav6-6A0A075B603 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6-6A0A075B603 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6-6A0A075B603 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6-6A0A075B603 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6-6A0A075B603 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6-6A0A075B603 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-6A0A075B603 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6-6A0A075B603 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Trav6-6A0A075B603 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav6-6A0A075B603 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-6A0A075B603 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-6A0A075B603 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav6-6A0A075B603 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms