Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.25□□□□□ -0.29
Upk1aQ9D132 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Upk1aQ9D132 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.24□□□□□ -0.29
Upk1aQ9D132 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm18733-201ENSMUST00000173950 856 ntBASIC13.24□□□□□ -0.29
Upk1aQ9D132 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Upk1aQ9D132 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm15957-201ENSMUST00000118893 974 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.23□□□□□ -0.29
Upk1aQ9D132 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Upk1aQ9D132 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Upk1aQ9D132 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms