Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MYCLP1-201ENST00000372451 1075 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AC103564.2-201ENST00000432853 1299 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 KRT17P6-201ENST00000453795 1220 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MINOS1P3-201ENST00000457048 203 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MIR3180-1-201ENST00000580374 94 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 MIR3180-3-201ENST00000584616 94 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AC091076.1-201ENST00000610741 619 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AC106886.4-201ENST00000623557 2502 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 KRT8P10-201ENST00000450021 1447 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TP73-AS1-210ENST00000637775 1455 ntBASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CHRDL1Q9BU40 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC111152.3-201ENST00000569699 673 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC011467.2-201ENST00000598425 242 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC069148.1-201ENST00000608741 768 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 NPAP1P7-201ENST00000613027 823 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 NSUN5P1-202ENST00000421140 1535 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 NSUN5P2-203ENST00000457352 1529 ntBASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CHRDL1Q9BU40 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CHRDL1Q9BU40 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms