Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rdh1Q8CGV4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Rdh1Q8CGV4 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Rdh1Q8CGV4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm15678-201ENSMUST00000117573 960 ntBASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Mir7654-201ENSMUST00000185082 70 ntBASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm18307-201ENSMUST00000206864 949 ntBASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Rdh1Q8CGV4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms