Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCL23P55773 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL23P55773 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL23P55773 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL23P55773 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 AC009477.1-201ENST00000452936 217 ntBASIC18.3■□□□□ 0.52
CCL23P55773 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 IGHV3-71-201ENST00000523324 359 ntBASIC18.3■□□□□ 0.52
CCL23P55773 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.3■□□□□ 0.52
CCL23P55773 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCL23P55773 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.3■□□□□ 0.52
CCL23P55773 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL23P55773 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CCL23P55773 EGFEM1P-202ENST00000431685 1563 ntBASIC18.3■□□□□ 0.52
CCL23P55773 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 ABALON-201ENST00000629058 1903 ntBASIC18.29■□□□□ 0.52
CCL23P55773 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 AC138969.3-201ENST00000546612 1459 ntBASIC18.29■□□□□ 0.52
CCL23P55773 AC138932.2-201ENST00000548268 1459 ntBASIC18.29■□□□□ 0.52
CCL23P55773 AC126755.4-201ENST00000549796 1459 ntBASIC18.29■□□□□ 0.52
CCL23P55773 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCL23P55773 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCL23P55773 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCL23P55773 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCL23P55773 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 MTND6P24-201ENST00000440466 518 ntBASIC18.29■□□□□ 0.52
CCL23P55773 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 KRT18P34-201ENST00000488218 1270 ntBASIC18.29■□□□□ 0.52
CCL23P55773 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL23P55773 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCL23P55773 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL23P55773 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL23P55773 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CCL23P55773 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL23P55773 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CCL23P55773 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL23P55773 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCL23P55773 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL23P55773 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL23P55773 BX323043.1-201ENST00000641006 1765 ntBASIC18.28■□□□□ 0.52
CCL23P55773 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCL23P55773 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCL23P55773 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCL23P55773 GPR53P-205ENST00000457298 1084 ntBASIC18.28■□□□□ 0.52
CCL23P55773 HILS1-202ENST00000545329 423 ntBASIC18.28■□□□□ 0.52
CCL23P55773 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.28■□□□□ 0.52
CCL23P55773 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.28■□□□□ 0.52
CCL23P55773 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.28■□□□□ 0.52
CCL23P55773 CYP2A7P1-201ENST00000595391 815 ntBASIC18.28■□□□□ 0.52
CCL23P55773 AC073389.1-201ENST00000595595 795 ntBASIC18.28■□□□□ 0.52
CCL23P55773 AC021097.1-201ENST00000607902 574 ntBASIC18.28■□□□□ 0.52
CCL23P55773 TEX28P1-201ENST00000613479 1221 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms