Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC3P19447 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ERCC3P19447 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ERCC3P19447 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.63■□□□□ 0.73
ERCC3P19447 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.63■□□□□ 0.73
ERCC3P19447 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.63■□□□□ 0.73
ERCC3P19447 AC107918.2-201ENST00000530817 355 ntBASIC19.63■□□□□ 0.73
ERCC3P19447 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ERCC3P19447 AC025678.2-201ENST00000562061 970 ntBASIC19.63■□□□□ 0.73
ERCC3P19447 AC099522.2-201ENST00000607001 744 ntBASIC19.63■□□□□ 0.73
ERCC3P19447 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC3P19447 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.63■□□□□ 0.73
ERCC3P19447 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC3P19447 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC3P19447 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC3P19447 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC3P19447 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ERCC3P19447 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ERCC3P19447 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC3P19447 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ERCC3P19447 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC3P19447 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.62■□□□□ 0.73
ERCC3P19447 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC3P19447 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC3P19447 AL355306.1-201ENST00000415580 579 ntBASIC19.62■□□□□ 0.73
ERCC3P19447 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.62■□□□□ 0.73
ERCC3P19447 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC3P19447 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERCC3P19447 AC093520.2-201ENST00000561830 333 ntBASIC19.62■□□□□ 0.73
ERCC3P19447 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.62■□□□□ 0.73
ERCC3P19447 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ERCC3P19447 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC3P19447 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC3P19447 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 AL671277.1-201ENST00000429656 993 ntBASIC19.61■□□□□ 0.73
ERCC3P19447 SLC25A6P5-201ENST00000435663 894 ntBASIC19.61■□□□□ 0.73
ERCC3P19447 AC140658.5-201ENST00000438532 169 ntBASIC19.61■□□□□ 0.73
ERCC3P19447 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ERCC3P19447 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
ERCC3P19447 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.61■□□□□ 0.73
ERCC3P19447 AC026120.1-201ENST00000611536 926 ntBASIC19.61■□□□□ 0.73
ERCC3P19447 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.61■□□□□ 0.73
ERCC3P19447 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC3P19447 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ERCC3P19447 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
ERCC3P19447 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC3P19447 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ERCC3P19447 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ERCC3P19447 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ERCC3P19447 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ERCC3P19447 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC3P19447 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC3P19447 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC3P19447 AL627223.1-201ENST00000416693 442 ntBASIC19.6■□□□□ 0.73
ERCC3P19447 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.6■□□□□ 0.73
ERCC3P19447 BCRP1-201ENST00000444246 691 ntBASIC19.6■□□□□ 0.73
ERCC3P19447 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ERCC3P19447 KRT8P48-201ENST00000515599 1220 ntBASIC19.6■□□□□ 0.73
ERCC3P19447 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.6■□□□□ 0.73
ERCC3P19447 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms