Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.7□□□□□ -0.54
CfdP03953 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.7□□□□□ -0.54
CfdP03953 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
CfdP03953 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
CfdP03953 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.7□□□□□ -0.54
CfdP03953 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CfdP03953 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CfdP03953 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CfdP03953 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
CfdP03953 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CfdP03953 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Gm6550-201ENSMUST00000187574 993 ntBASIC11.69□□□□□ -0.54
CfdP03953 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.69□□□□□ -0.54
CfdP03953 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CfdP03953 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.69□□□□□ -0.54
CfdP03953 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CfdP03953 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CfdP03953 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.68□□□□□ -0.54
CfdP03953 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.68□□□□□ -0.54
CfdP03953 Gm7230-201ENSMUST00000173026 815 ntBASIC11.68□□□□□ -0.54
CfdP03953 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.68□□□□□ -0.54
CfdP03953 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC11.68□□□□□ -0.54
CfdP03953 Gm33142-201ENSMUST00000193913 867 ntBASIC11.68□□□□□ -0.54
CfdP03953 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.68□□□□□ -0.54
CfdP03953 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.68□□□□□ -0.54
CfdP03953 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.68□□□□□ -0.54
CfdP03953 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CfdP03953 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.68□□□□□ -0.54
CfdP03953 Gm10154-201ENSMUST00000084445 354 ntBASIC11.68□□□□□ -0.54
CfdP03953 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CfdP03953 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms