Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ttc3O88196 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.55□□□□□ -0.08
Ttc3O88196 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Ttc3O88196 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ttc3O88196 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.55□□□□□ -0.08
Ttc3O88196 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Ttc3O88196 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ttc3O88196 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.55□□□□□ -0.08
Ttc3O88196 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.55□□□□□ -0.08
Ttc3O88196 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.55□□□□□ -0.08
Ttc3O88196 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ttc3O88196 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Mir1938-201ENSMUST00000158746 100 ntBASIC14.54□□□□□ -0.08
Ttc3O88196 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm27839-201ENSMUST00000184242 106 ntBASIC14.54□□□□□ -0.08
Ttc3O88196 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.54□□□□□ -0.08
Ttc3O88196 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.54□□□□□ -0.08
Ttc3O88196 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ttc3O88196 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Ttc3O88196 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ttc3O88196 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ttc3O88196 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ttc3O88196 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ttc3O88196 Gm22331-201ENSMUST00000158066 136 ntBASIC14.54□□□□□ -0.08
Ttc3O88196 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ttc3O88196 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.53□□□□□ -0.08
Ttc3O88196 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ttc3O88196 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Ttc3O88196 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.53□□□□□ -0.08
Ttc3O88196 Gm37424-201ENSMUST00000191727 561 ntBASIC14.53□□□□□ -0.08
Ttc3O88196 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.53□□□□□ -0.08
Ttc3O88196 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.53□□□□□ -0.08
Ttc3O88196 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.53□□□□□ -0.08
Ttc3O88196 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ttc3O88196 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ttc3O88196 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.53□□□□□ -0.08
Ttc3O88196 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms