Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MSI1O43347 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
MSI1O43347 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 AC092919.2-201ENST00000623631 1645 ntBASIC17.59■□□□□ 0.41
MSI1O43347 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.59■□□□□ 0.41
MSI1O43347 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 AC007064.4-201ENST00000637740 555 ntBASIC17.59■□□□□ 0.41
MSI1O43347 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.59■□□□□ 0.41
MSI1O43347 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.59■□□□□ 0.41
MSI1O43347 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MSI1O43347 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.58■□□□□ 0.41
MSI1O43347 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
MSI1O43347 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
MSI1O43347 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.58■□□□□ 0.41
MSI1O43347 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.58■□□□□ 0.41
MSI1O43347 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
MSI1O43347 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
MSI1O43347 PCDHB17P-201ENST00000539533 2393 ntBASIC17.58■□□□□ 0.41
MSI1O43347 KRT8P49-201ENST00000604166 1432 ntBASIC17.58■□□□□ 0.41
MSI1O43347 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 AL021920.2-201ENST00000624828 1351 ntBASIC17.58■□□□□ 0.4
MSI1O43347 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.58■□□□□ 0.4
MSI1O43347 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.58■□□□□ 0.4
MSI1O43347 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.58■□□□□ 0.4
MSI1O43347 ALG1L5P-201ENST00000482043 771 ntBASIC17.58■□□□□ 0.4
MSI1O43347 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 AL078644.1-201ENST00000609881 752 ntBASIC17.58■□□□□ 0.4
MSI1O43347 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.58■□□□□ 0.4
MSI1O43347 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.58■□□□□ 0.4
MSI1O43347 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
MSI1O43347 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
MSI1O43347 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.58■□□□□ 0.4
MSI1O43347 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MSI1O43347 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
MSI1O43347 AC099398.1-201ENST00000567919 2776 ntBASIC17.57■□□□□ 0.4
MSI1O43347 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
MSI1O43347 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
MSI1O43347 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms