Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 AL390719.2-201ENST00000606993 987 ntBASIC20.92■□□□□ 0.94
UPF2Q9HAU5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 AL049757.1-201ENST00000616842 1596 ntBASIC20.92■□□□□ 0.94
UPF2Q9HAU5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.92■□□□□ 0.94
UPF2Q9HAU5 AC092364.2-201ENST00000596710 2692 ntBASIC20.91■□□□□ 0.94
UPF2Q9HAU5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 STK25P1-201ENST00000585406 838 ntBASIC20.91■□□□□ 0.94
UPF2Q9HAU5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 AC067930.6-201ENST00000623257 4947 ntBASIC20.91■□□□□ 0.94
UPF2Q9HAU5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UPF2Q9HAU5 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 AL391256.1-201ENST00000443260 1855 ntBASIC20.9■□□□□ 0.94
UPF2Q9HAU5 AL135999.2-201ENST00000622438 1686 ntBASIC20.9■□□□□ 0.94
UPF2Q9HAU5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.9■□□□□ 0.94
UPF2Q9HAU5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.9■□□□□ 0.94
UPF2Q9HAU5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 AC126755.1-201ENST00000525846 6405 ntBASIC20.9■□□□□ 0.94
UPF2Q9HAU5 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
UPF2Q9HAU5 Z83836.1-201ENST00000624605 1642 ntBASIC20.89■□□□□ 0.94
UPF2Q9HAU5 AC007950.2-201ENST00000615045 2347 ntBASIC20.89■□□□□ 0.94
UPF2Q9HAU5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF2Q9HAU5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF2Q9HAU5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UPF2Q9HAU5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UPF2Q9HAU5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UPF2Q9HAU5 SLC25A3P1-201ENST00000443844 931 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms