Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ssr3Q9DCF9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ssr3Q9DCF9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Ssr3Q9DCF9 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ssr3Q9DCF9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms