Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.29□□□□□ -0.28
Chmp1b1Q99LU0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Chmp1b1Q99LU0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Chmp1b1Q99LU0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Chmp1b1Q99LU0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Chmp1b1Q99LU0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms