Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 AC158538.2-201ENSMUST00000225455 906 ntBASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm7901-201ENSMUST00000120430 1597 ntBASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Hist3h2bbQ8CGP0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 AC122769.4-201ENSMUST00000228166 901 ntBASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Hist3h2bbQ8CGP0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Hist3h2bbQ8CGP0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms