Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 AC074051.2-201ENST00000565115 352 ntBASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 LINC00167-201ENST00000530583 1419 ntBASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
FOXR1Q6PIV2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 TSPY19P-201ENST00000418461 509 ntBASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 TSPY18P-201ENST00000441642 509 ntBASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 AC079781.3-201ENST00000449110 356 ntBASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 AP003733.1-201ENST00000491725 852 ntBASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
FOXR1Q6PIV2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 AL022342.1-201ENST00000400363 863 ntBASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 DRAXINP1-201ENST00000437611 948 ntBASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 AC012615.1-201ENST00000565797 1299 ntBASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 AC010240.3-201ENST00000607688 395 ntBASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
FOXR1Q6PIV2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.77■□□□□ 0.43
FOXR1Q6PIV2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
FOXR1Q6PIV2 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms