Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.97□□□□□ -0.17
LdlrP35951 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.97□□□□□ -0.17
LdlrP35951 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LdlrP35951 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LdlrP35951 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.97□□□□□ -0.17
LdlrP35951 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.97□□□□□ -0.17
LdlrP35951 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LdlrP35951 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LdlrP35951 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LdlrP35951 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.96□□□□□ -0.17
LdlrP35951 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.96□□□□□ -0.17
LdlrP35951 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Rpph1-201ENSMUST00000175096 319 ntBASIC13.96□□□□□ -0.17
LdlrP35951 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.96□□□□□ -0.17
LdlrP35951 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.96□□□□□ -0.17
LdlrP35951 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LdlrP35951 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LdlrP35951 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
LdlrP35951 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LdlrP35951 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LdlrP35951 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.96□□□□□ -0.18
LdlrP35951 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.95□□□□□ -0.18
LdlrP35951 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.95□□□□□ -0.18
LdlrP35951 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.95□□□□□ -0.18
LdlrP35951 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.95□□□□□ -0.18
LdlrP35951 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.95□□□□□ -0.18
LdlrP35951 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LdlrP35951 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LdlrP35951 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LdlrP35951 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Gm22065-201ENSMUST00000103753 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm22066-201ENSMUST00000103761 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24932-201ENSMUST00000103763 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24115-201ENSMUST00000103799 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm22190-201ENSMUST00000103827 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm22191-201ENSMUST00000103831 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24721-201ENSMUST00000103849 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm28018-201ENSMUST00000103869 110 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms