Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 PAWRP1-201ENST00000451083 565 ntBASIC14.28□□□□□ -0.12
ABCA1O95477 TIMM8BP1-201ENST00000452384 211 ntBASIC14.28□□□□□ -0.12
ABCA1O95477 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 AC069335.1-201ENST00000489972 472 ntBASIC14.28□□□□□ -0.12
ABCA1O95477 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ABCA1O95477 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.28□□□□□ -0.12
ABCA1O95477 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.28□□□□□ -0.12
ABCA1O95477 PP12613-201ENST00000424958 2230 ntBASIC14.28□□□□□ -0.12
ABCA1O95477 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ABCA1O95477 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
ABCA1O95477 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 AC002472.2-201ENST00000442739 958 ntBASIC14.27□□□□□ -0.12
ABCA1O95477 FAM86GP-201ENST00000448322 971 ntBASIC14.27□□□□□ -0.12
ABCA1O95477 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.27□□□□□ -0.12
ABCA1O95477 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.27□□□□□ -0.12
ABCA1O95477 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.27□□□□□ -0.12
ABCA1O95477 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ABCA1O95477 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 AC009336.1-201ENST00000608941 1553 ntBASIC14.27□□□□□ -0.12
ABCA1O95477 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ABCA1O95477 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.27□□□□□ -0.12
ABCA1O95477 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC14.27□□□□□ -0.12
ABCA1O95477 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ABCA1O95477 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.27□□□□□ -0.13
ABCA1O95477 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCA1O95477 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ABCA1O95477 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.27□□□□□ -0.13
ABCA1O95477 AC093520.2-201ENST00000561830 333 ntBASIC14.27□□□□□ -0.13
ABCA1O95477 AC051619.7-201ENST00000568314 623 ntBASIC14.27□□□□□ -0.13
ABCA1O95477 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCA1O95477 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ABCA1O95477 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.27□□□□□ -0.13
ABCA1O95477 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCA1O95477 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
ABCA1O95477 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.27□□□□□ -0.13
ABCA1O95477 PI4KAP1-204ENST00000612579 1703 ntBASIC14.27□□□□□ -0.13
ABCA1O95477 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.27□□□□□ -0.13
ABCA1O95477 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ABCA1O95477 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ABCA1O95477 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.26□□□□□ -0.13
ABCA1O95477 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 AC138028.4-201ENST00000564984 1845 ntBASIC14.26□□□□□ -0.13
ABCA1O95477 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ABCA1O95477 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ABCA1O95477 AC015922.1-201ENST00000421102 1152 ntBASIC14.26□□□□□ -0.13
ABCA1O95477 AC092474.2-201ENST00000424288 719 ntBASIC14.26□□□□□ -0.13
ABCA1O95477 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.26□□□□□ -0.13
ABCA1O95477 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.26□□□□□ -0.13
ABCA1O95477 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.26□□□□□ -0.13
ABCA1O95477 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ABCA1O95477 AC008764.6-201ENST00000595909 2069 ntBASIC14.26□□□□□ -0.13
ABCA1O95477 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ABCA1O95477 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms