Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.16□□□□□ -0.14
Chrna4O70174 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Chrna4O70174 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chrna4O70174 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chrna4O70174 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.16□□□□□ -0.14
Chrna4O70174 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chrna4O70174 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Chrna4O70174 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Chrna4O70174 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chrna4O70174 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.15□□□□□ -0.14
Chrna4O70174 Gm44344-201ENSMUST00000200287 129 ntBASIC14.15□□□□□ -0.14
Chrna4O70174 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chrna4O70174 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.15□□□□□ -0.14
Chrna4O70174 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.15□□□□□ -0.14
Chrna4O70174 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chrna4O70174 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.15□□□□□ -0.15
Chrna4O70174 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Chrna4O70174 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Chrna4O70174 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chrna4O70174 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
Chrna4O70174 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.14□□□□□ -0.15
Chrna4O70174 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Mir6956-201ENSMUST00000183598 62 ntBASIC14.14□□□□□ -0.15
Chrna4O70174 Gm33320-201ENSMUST00000192232 530 ntBASIC14.14□□□□□ -0.15
Chrna4O70174 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.14□□□□□ -0.15
Chrna4O70174 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.14□□□□□ -0.15
Chrna4O70174 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Chrna4O70174 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chrna4O70174 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Chrna4O70174 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Chrna4O70174 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chrna4O70174 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Chrna4O70174 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Chrna4O70174 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Chrna4O70174 Gm15460-201ENSMUST00000118147 391 ntBASIC14.13□□□□□ -0.15
Chrna4O70174 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.13□□□□□ -0.15
Chrna4O70174 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms