Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chaf1bQ9D0N7 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Gm27300-201ENSMUST00000184085 97 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Gm27335-201ENSMUST00000184758 97 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Gm37230-201ENSMUST00000194491 818 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 AV026068-213ENSMUST00000223675 1171 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chaf1bQ9D0N7 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chaf1bQ9D0N7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gm7862-201ENSMUST00000121461 292 ntBASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gm7977-201ENSMUST00000193787 748 ntBASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gm45098-201ENSMUST00000207179 657 ntBASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chaf1bQ9D0N7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chaf1bQ9D0N7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chaf1bQ9D0N7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms