Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC22.26■■□□□ 1.15
ABCA3Q99758 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC22.26■■□□□ 1.15
ABCA3Q99758 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCA3Q99758 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC22.26■■□□□ 1.15
ABCA3Q99758 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC22.25■■□□□ 1.15
ABCA3Q99758 AC004945.1-201ENST00000416738 983 ntBASIC22.25■■□□□ 1.15
ABCA3Q99758 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
ABCA3Q99758 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC22.25■■□□□ 1.15
ABCA3Q99758 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
ABCA3Q99758 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
ABCA3Q99758 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.25■■□□□ 1.15
ABCA3Q99758 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ABCA3Q99758 AL138781.2-201ENST00000617896 1843 ntBASIC22.25■■□□□ 1.15
ABCA3Q99758 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
ABCA3Q99758 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC22.25■■□□□ 1.15
ABCA3Q99758 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ABCA3Q99758 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ABCA3Q99758 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCA3Q99758 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCA3Q99758 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCA3Q99758 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
ABCA3Q99758 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCA3Q99758 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCA3Q99758 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ABCA3Q99758 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCA3Q99758 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
ABCA3Q99758 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC22.24■■□□□ 1.15
ABCA3Q99758 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC22.24■■□□□ 1.15
ABCA3Q99758 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC22.24■■□□□ 1.15
ABCA3Q99758 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 AC108860.2-201ENST00000562760 2183 ntBASIC22.24■■□□□ 1.15
ABCA3Q99758 AL133338.1-201ENST00000565695 1517 ntBASIC22.24■■□□□ 1.15
ABCA3Q99758 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCA3Q99758 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.24■■□□□ 1.15
ABCA3Q99758 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ABCA3Q99758 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
ABCA3Q99758 BCYRN1-201ENST00000418539 200 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC22.23■■□□□ 1.15
ABCA3Q99758 CROCCP4-201ENST00000457096 498 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 AC099548.2-209ENST00000480264 625 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC22.23■■□□□ 1.15
ABCA3Q99758 MAX-210ENST00000555419 765 ntTSL 5 BASIC22.23■■□□□ 1.15
ABCA3Q99758 NAA38-207ENST00000576861 556 ntTSL 3 BASIC22.23■■□□□ 1.15
ABCA3Q99758 AL391069.4-201ENST00000609583 481 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 AC093525.9-201ENST00000624961 1746 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.23■■□□□ 1.15
ABCA3Q99758 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
ABCA3Q99758 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC22.23■■□□□ 1.15
ABCA3Q99758 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 GALT-202ENST00000450095 1280 ntTSL 2 BASIC22.23■■□□□ 1.15
ABCA3Q99758 SERBP1P3-201ENST00000459980 809 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 AC010319.3-201ENST00000597028 470 ntBASIC22.23■■□□□ 1.15
ABCA3Q99758 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCA3Q99758 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ABCA3Q99758 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ABCA3Q99758 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC22.22■■□□□ 1.15
ABCA3Q99758 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ABCA3Q99758 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ABCA3Q99758 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC22.22■■□□□ 1.15
ABCA3Q99758 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
ABCA3Q99758 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ABCA3Q99758 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.22■■□□□ 1.15
ABCA3Q99758 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
ABCA3Q99758 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ABCA3Q99758 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC22.22■■□□□ 1.15
ABCA3Q99758 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms