Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Gm27628-201ENSMUST00000184911 107 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Mzt1-203ENSMUST00000227948 952 ntBASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Pcdh18Q8VHR0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdh18Q8VHR0 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm27300-201ENSMUST00000184085 97 ntBASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm27335-201ENSMUST00000184758 97 ntBASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdh18Q8VHR0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdh18Q8VHR0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdh18Q8VHR0 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms