Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Gm13859-201ENSMUST00000119936 1423 ntBASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rab11fip3Q8CHD8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Gm7446-201ENSMUST00000221035 1240 ntBASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 AC150560.1-201ENSMUST00000227731 1187 ntBASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rab11fip3Q8CHD8 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm15678-201ENSMUST00000117573 960 ntBASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm26464-201ENSMUST00000157094 305 ntBASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rab11fip3Q8CHD8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rab11fip3Q8CHD8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms