Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.21■□□□□ 0.19
Prpf40bQ80W14 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm12390-201ENSMUST00000117897 397 ntBASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm42693-201ENSMUST00000196779 631 ntBASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Prpf40bQ80W14 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.19■□□□□ 0.18
Prpf40bQ80W14 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.19■□□□□ 0.18
Prpf40bQ80W14 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Gm5356-201ENSMUST00000093326 615 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Olfr582-201ENSMUST00000098212 960 ntBASIC16.18■□□□□ 0.18
Prpf40bQ80W14 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms