Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm4271-201ENSMUST00000174444 973 ntBASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm3809-201ENSMUST00000180973 1006 ntBASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ddx55Q6ZPL9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gm1335-201ENSMUST00000121653 386 ntBASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gm45930-201ENSMUST00000221330 292 ntBASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Ddx55Q6ZPL9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gm43118-201ENSMUST00000199149 775 ntBASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 AC126549.2-201ENSMUST00000223997 1976 ntBASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ddx55Q6ZPL9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm27501-201ENSMUST00000183599 107 ntBASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm38241-201ENSMUST00000192641 898 ntBASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.86■□□□□ 0.13
Ddx55Q6ZPL9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms