Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm7230-201ENSMUST00000173026 815 ntBASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm6550-201ENSMUST00000187574 993 ntBASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Gm18669-201ENSMUST00000216049 778 ntBASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Trav15-1-dv6-1Q5R1D2 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms