Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm12644-201ENSMUST00000119935 606 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 Gm15372-201ENSMUST00000120729 834 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 Gm11780-201ENSMUST00000136880 516 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.69□□□□□ -0.54
Lsm5P62322 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm5P62322 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm6728-201ENSMUST00000178117 1065 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm5P62322 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm7787-201ENSMUST00000216858 688 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.69□□□□□ -0.54
Lsm5P62322 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm5P62322 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Lsm5P62322 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.69□□□□□ -0.54
Lsm5P62322 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm5P62322 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm5P62322 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm5P62322 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.68□□□□□ -0.54
Lsm5P62322 AA414768-201ENSMUST00000121924 1257 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm23634-201ENSMUST00000175071 91 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Mir6982-201ENSMUST00000184354 68 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm18246-201ENSMUST00000221023 728 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.68□□□□□ -0.54
Lsm5P62322 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Lsm5P62322 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm5P62322 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm5P62322 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Lsm5P62322 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC11.68□□□□□ -0.54
Lsm5P62322 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
Lsm5P62322 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Lsm5P62322 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.68□□□□□ -0.54
Lsm5P62322 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Lsm5P62322 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Lsm5P62322 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.67□□□□□ -0.54
Lsm5P62322 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Lsm5P62322 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms