Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.39□□□□□ -0.11
Mmp13P33435 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.39□□□□□ -0.11
Mmp13P33435 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Mmp13P33435 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Mmp13P33435 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.38□□□□□ -0.11
Mmp13P33435 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Mmp13P33435 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.38□□□□□ -0.11
Mmp13P33435 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Mmp13P33435 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
Mmp13P33435 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Gm10275-202ENSMUST00000168697 495 ntBASIC14.38□□□□□ -0.11
Mmp13P33435 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.38□□□□□ -0.11
Mmp13P33435 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.38□□□□□ -0.11
Mmp13P33435 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Gm10275-201ENSMUST00000092620 635 ntBASIC14.38□□□□□ -0.11
Mmp13P33435 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.38□□□□□ -0.11
Mmp13P33435 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Mmp13P33435 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.38□□□□□ -0.11
Mmp13P33435 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Mmp13P33435 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Mmp13P33435 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Mmp13P33435 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.37□□□□□ -0.11
Mmp13P33435 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Mmp13P33435 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Mmp13P33435 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Mmp13P33435 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Mmp13P33435 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms