Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LMO1P25800 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO1P25800 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.32□□□□□ -0.12
LMO1P25800 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LMO1P25800 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
LMO1P25800 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LMO1P25800 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.31□□□□□ -0.12
LMO1P25800 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO1P25800 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 BX005266.1-201ENST00000473402 457 ntBASIC14.31□□□□□ -0.12
LMO1P25800 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
LMO1P25800 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 DUX4L17-201ENST00000557360 1267 ntBASIC14.31□□□□□ -0.12
LMO1P25800 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.31□□□□□ -0.12
LMO1P25800 AC064862.7-201ENST00000604520 867 ntBASIC14.31□□□□□ -0.12
LMO1P25800 REXO1L6P-202ENST00000619970 1078 ntBASIC14.31□□□□□ -0.12
LMO1P25800 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LMO1P25800 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.31□□□□□ -0.12
LMO1P25800 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LMO1P25800 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LMO1P25800 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.31□□□□□ -0.12
LMO1P25800 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LMO1P25800 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 AC022188.1-201ENST00000620960 1664 ntBASIC14.3□□□□□ -0.12
LMO1P25800 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO1P25800 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO1P25800 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 FGFR3P6-201ENST00000457012 610 ntBASIC14.3□□□□□ -0.12
LMO1P25800 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LMO1P25800 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO1P25800 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO1P25800 PRELID1P1-202ENST00000567272 903 ntBASIC14.3□□□□□ -0.12
LMO1P25800 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.3□□□□□ -0.12
LMO1P25800 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.3□□□□□ -0.12
LMO1P25800 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
LMO1P25800 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LMO1P25800 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LMO1P25800 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LMO1P25800 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.3□□□□□ -0.12
LMO1P25800 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO1P25800 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.29□□□□□ -0.12
LMO1P25800 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO1P25800 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO1P25800 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LMO1P25800 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms