Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.97■□□□□ 0.31
Col4a1P02463 Gm38158-201ENSMUST00000194617 339 ntBASIC16.97■□□□□ 0.31
Col4a1P02463 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.97■□□□□ 0.31
Col4a1P02463 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col4a1P02463 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.96■□□□□ 0.31
Col4a1P02463 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Col4a1P02463 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col4a1P02463 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Col4a1P02463 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a1P02463 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a1P02463 Gm11618-201ENSMUST00000117946 267 ntBASIC16.96■□□□□ 0.31
Col4a1P02463 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.96■□□□□ 0.31
Col4a1P02463 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC16.96■□□□□ 0.31
Col4a1P02463 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.96■□□□□ 0.31
Col4a1P02463 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col4a1P02463 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a1P02463 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Col4a1P02463 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col4a1P02463 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col4a1P02463 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Gm27501-201ENSMUST00000183599 107 ntBASIC16.95■□□□□ 0.3
Col4a1P02463 Gm43758-201ENSMUST00000199500 367 ntBASIC16.95■□□□□ 0.3
Col4a1P02463 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col4a1P02463 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col4a1P02463 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Col4a1P02463 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.94■□□□□ 0.3
Col4a1P02463 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm26927-201ENSMUST00000182385 965 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.94■□□□□ 0.3
Col4a1P02463 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.94■□□□□ 0.3
Col4a1P02463 AC133598.1-201ENSMUST00000224327 660 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Col4a1P02463 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col4a1P02463 Gm15544-201ENSMUST00000118776 1531 ntBASIC16.94■□□□□ 0.3
Col4a1P02463 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.94■□□□□ 0.3
Col4a1P02463 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col4a1P02463 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms