Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PDGFBP01127 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 ACTBP11-201ENST00000436287 1126 ntBASIC16.93■□□□□ 0.3
PDGFBP01127 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 AC044860.1-202ENST00000559481 777 ntBASIC16.93■□□□□ 0.3
PDGFBP01127 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.93■□□□□ 0.3
PDGFBP01127 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.93■□□□□ 0.3
PDGFBP01127 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.93■□□□□ 0.3
PDGFBP01127 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDGFBP01127 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 CROCCP3-202ENST00000420820 1947 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
PDGFBP01127 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
PDGFBP01127 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 AC092933.1-201ENST00000393644 945 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.92■□□□□ 0.3
PDGFBP01127 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.92■□□□□ 0.3
PDGFBP01127 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 AL079307.3-201ENST00000556114 283 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 AC105021.1-202ENST00000570572 669 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 RN7SL219P-201ENST00000582872 296 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.92■□□□□ 0.3
PDGFBP01127 AL133215.2-201ENST00000609242 977 ntBASIC16.92■□□□□ 0.3
PDGFBP01127 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDGFBP01127 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFBP01127 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFBP01127 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDGFBP01127 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFBP01127 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.91■□□□□ 0.3
PDGFBP01127 MYCLP2-201ENST00000449268 967 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 ELK1P1-201ENST00000485699 580 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 AL512361.1-201ENST00000554200 418 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 AC091167.2-201ENST00000579581 588 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFBP01127 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
PDGFBP01127 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PDGFBP01127 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 LINC00896-202ENST00000609602 2128 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFBP01127 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFBP01127 KRT18P55-202ENST00000578578 1546 ntBASIC16.91■□□□□ 0.3
PDGFBP01127 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PDGFBP01127 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFBP01127 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms