Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.53□□□□□ -0.4
CcnkO88874 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.53□□□□□ -0.4
CcnkO88874 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.53□□□□□ -0.4
CcnkO88874 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.53□□□□□ -0.4
CcnkO88874 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Gm14140-201ENSMUST00000119999 995 ntBASIC12.53□□□□□ -0.4
CcnkO88874 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.53□□□□□ -0.4
CcnkO88874 Psmb5-202ENSMUST00000227257 622 ntBASIC12.53□□□□□ -0.4
CcnkO88874 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Paupar-201ENSMUST00000194826 3482 ntBASIC12.53□□□□□ -0.4
CcnkO88874 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
CcnkO88874 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.53□□□□□ -0.4
CcnkO88874 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CcnkO88874 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Carlr-201ENSMUST00000181515 2574 ntBASIC12.52□□□□□ -0.4
CcnkO88874 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CcnkO88874 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.52□□□□□ -0.41
CcnkO88874 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.52□□□□□ -0.41
CcnkO88874 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.52□□□□□ -0.41
CcnkO88874 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CcnkO88874 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CcnkO88874 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
CcnkO88874 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Gm1401-201ENSMUST00000122048 772 ntBASIC12.51□□□□□ -0.41
CcnkO88874 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CcnkO88874 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CcnkO88874 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms