Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tnfrsf11bO08712 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Matn2-206ENSMUST00000228570 2798 ntBASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.27□□□□□ -0.12
Tnfrsf11bO08712 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Gm6443-201ENSMUST00000203599 874 ntBASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tnfrsf11bO08712 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 AA543401-201ENSMUST00000164248 1269 ntBASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Gm45453-201ENSMUST00000211758 853 ntBASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tnfrsf11bO08712 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm9824-201ENSMUST00000178707 561 ntBASIC14.25□□□□□ -0.13
Tnfrsf11bO08712 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms