Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Ddx39aQ8VDW0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ddx39aQ8VDW0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Gm18187-201ENSMUST00000196476 984 ntBASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Gm5425-201ENSMUST00000214125 459 ntBASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.59■□□□□ 0.09
Ddx39aQ8VDW0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ddx39aQ8VDW0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Ddx39aQ8VDW0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms