Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.57■□□□□ 0.4
Nkx2-3P97334 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm42929-201ENSMUST00000198374 1286 ntBASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.57■□□□□ 0.4
Nkx2-3P97334 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.57■□□□□ 0.4
Nkx2-3P97334 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.57■□□□□ 0.4
Nkx2-3P97334 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Gm27514-201ENSMUST00000183692 110 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 Gm45841-201ENSMUST00000207700 164 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Gm18473-201ENSMUST00000220543 868 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx2-3P97334 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm5687-201ENSMUST00000118252 640 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm12403-201ENSMUST00000121384 959 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm8584-201ENSMUST00000171982 758 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm27331-201ENSMUST00000183705 60 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm9124-201ENSMUST00000191789 1092 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm9113-201ENSMUST00000192510 1018 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm9131-201ENSMUST00000193557 1089 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm9121-201ENSMUST00000193749 1071 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm40466-201ENSMUST00000212174 422 ntBASIC17.55■□□□□ 0.4
Nkx2-3P97334 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx2-3P97334 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Gm10156-201ENSMUST00000122364 462 ntBASIC17.54■□□□□ 0.4
Nkx2-3P97334 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx2-3P97334 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms