Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Atxn1P54254 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Atxn1P54254 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.97□□□□□ -0.17
Atxn1P54254 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.97□□□□□ -0.17
Atxn1P54254 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.97□□□□□ -0.17
Atxn1P54254 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Atxn1P54254 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.97□□□□□ -0.17
Atxn1P54254 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Atxn1P54254 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.96□□□□□ -0.17
Atxn1P54254 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.96□□□□□ -0.17
Atxn1P54254 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Atxn1P54254 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Atxn1P54254 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.96□□□□□ -0.17
Atxn1P54254 Gm27731-201ENSMUST00000185192 107 ntBASIC13.96□□□□□ -0.17
Atxn1P54254 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.96□□□□□ -0.17
Atxn1P54254 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.96□□□□□ -0.17
Atxn1P54254 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Atxn1P54254 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Atxn1P54254 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Atxn1P54254 Carlr-201ENSMUST00000181515 2574 ntBASIC13.96□□□□□ -0.17
Atxn1P54254 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.96□□□□□ -0.18
Atxn1P54254 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Atxn1P54254 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.96□□□□□ -0.18
Atxn1P54254 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.95□□□□□ -0.18
Atxn1P54254 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.95□□□□□ -0.18
Atxn1P54254 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.95□□□□□ -0.18
Atxn1P54254 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Atxn1P54254 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Atxn1P54254 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms