Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HCFC1P51610 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 AC005034.1-201ENST00000426657 489 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.78□□□□□ -0.04
HCFC1P51610 AC244107.1-201ENST00000442033 332 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.78□□□□□ -0.04
HCFC1P51610 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 AC004890.2-204ENST00000481968 304 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 FO538757.1-201ENST00000623083 1397 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 AL645608.8-201ENST00000606034 2086 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 AC007274.1-201ENST00000439805 662 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 AL590560.3-201ENST00000623350 461 ntBASIC14.78□□□□□ -0.04
HCFC1P51610 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
HCFC1P51610 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
HCFC1P51610 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.78□□□□□ -0.04
HCFC1P51610 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.77□□□□□ -0.04
HCFC1P51610 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HCFC1P51610 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.77□□□□□ -0.04
HCFC1P51610 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.77□□□□□ -0.04
HCFC1P51610 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.77□□□□□ -0.04
HCFC1P51610 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.77□□□□□ -0.04
HCFC1P51610 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
HCFC1P51610 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.77□□□□□ -0.04
HCFC1P51610 ALG1L8P-201ENST00000533887 760 ntBASIC14.77□□□□□ -0.04
HCFC1P51610 AC005412.3-201ENST00000580309 715 ntBASIC14.77□□□□□ -0.04
HCFC1P51610 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.77□□□□□ -0.04
HCFC1P51610 AL158211.3-201ENST00000607385 239 ntBASIC14.77□□□□□ -0.04
HCFC1P51610 AL139327.4-201ENST00000612362 153 ntBASIC14.77□□□□□ -0.04
HCFC1P51610 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HCFC1P51610 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HCFC1P51610 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
HCFC1P51610 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.77□□□□□ -0.05
HCFC1P51610 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.77□□□□□ -0.05
HCFC1P51610 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HCFC1P51610 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
HCFC1P51610 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
HCFC1P51610 AC012569.1-201ENST00000591191 1524 ntBASIC14.77□□□□□ -0.05
HCFC1P51610 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
HCFC1P51610 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.76□□□□□ -0.05
HCFC1P51610 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.76□□□□□ -0.05
HCFC1P51610 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.76□□□□□ -0.05
HCFC1P51610 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.76□□□□□ -0.05
HCFC1P51610 AL031055.1-201ENST00000606362 631 ntBASIC14.76□□□□□ -0.05
HCFC1P51610 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.76□□□□□ -0.05
HCFC1P51610 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.76□□□□□ -0.05
HCFC1P51610 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HCFC1P51610 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HCFC1P51610 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.76□□□□□ -0.05
HCFC1P51610 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.76□□□□□ -0.05
HCFC1P51610 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms